Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023165.1 Corchorus olitorius cultivar O-4 contig23198, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4759

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
612--640
5
6.0
5
92
8
51
17
0
0
82
0.66
1578--1742
39
4.3
39
80
6
185
40
14
17
27
1.88
1685--1815
39
3.4
39
82
4
158
41
12
17
28
1.85
1913--1953
20
2.0
20
85
0
55
24
26
34
14
1.94
2077--2888
141
5.7
140
89
1
1183
32
16
20
30
1.95
4682--4759
40
2.0
40
89
0
120
38
21
21
17
1.93

Tables:   1

The End!