Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023167.1 Corchorus olitorius cultivar O-4 contig23200, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20559

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--36
2
16.5
2
100
0
66
48
0
0
51
1.00
6900--6949
23
2.2
23
96
3
93
40
20
8
32
1.81
6935--7468
201
2.7
197
84
7
651
37
9
11
41
1.75
8656--8999
172
2.0
172
94
1
600
33
20
20
25
1.97
8937--9040
52
2.0
52
94
0
181
25
22
26
25
2.00
8996--9039
22
2.0
22
86
0
61
25
25
22
27
2.00
11991--12034
22
2.0
22
86
0
61
27
25
20
27
1.99
11985--12089
52
2.0
52
96
3
194
26
24
25
22
2.00
14370--14418
18
2.6
19
90
6
73
53
0
0
46
1.00
14375--14421
4
12.2
4
82
8
53
48
0
0
51
1.00
16251--16281
15
2.1
15
100
0
62
19
6
12
61
1.53
17332--17384
16
3.3
16
92
5
81
45
1
11
41
1.51
18941--18981
3
14.0
3
94
5
75
34
0
0
65
0.93

Tables:   1

The End!