Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023186.1 Corchorus olitorius cultivar O-4 contig23219, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19159

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
687--725
20
1.9
21
94
5
71
2
20
0
76
0.90
814--916
14
7.7
14
72
9
81
3
43
39
12
1.61
806--930
40
3.1
40
91
0
196
4
41
40
13
1.66
13223--13276
22
2.3
22
79
17
56
72
3
18
5
1.20
13690--13754
26
2.4
28
78
17
75
67
0
20
12
1.22
14034--14076
2
23.5
2
82
17
58
51
0
48
0
1.00
14034--14080
16
2.8
16
93
6
76
51
0
48
0
1.00
14034--14076
18
2.4
18
100
0
86
51
0
48
0
1.00
15130--15366
54
4.4
53
78
8
223
27
15
20
36
1.93
15155--15402
107
2.3
107
78
8
252
28
16
20
34
1.95
15273--15583
54
5.7
55
81
6
300
26
18
22
32
1.97
15552--15715
35
4.7
35
94
1
285
29
12
18
39
1.88
15552--15715
69
2.4
70
92
2
285
29
12
18
39
1.88
17141--17215
28
2.7
27
74
13
64
38
13
22
25
1.90

Tables:   1

The End!