Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01002319.1 Corchorus olitorius cultivar O-4 contig02319, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1008

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
308--342
18
1.9
18
94
0
61
28
8
11
51
1.67
589--649
21
2.8
22
80
9
63
37
8
14
39
1.76
631--680
26
1.9
26
91
0
82
30
10
32
28
1.89
652--710
22
2.7
22
84
2
66
37
10
25
27
1.88
830--924
22
4.4
22
76
4
77
33
10
15
40
1.82

Tables:   1

The End!