Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023191.1 Corchorus olitorius cultivar O-4 contig23224, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16499

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5029--5082
27
2.0
27
100
0
108
33
18
22
25
1.97
6648--6835
95
2.0
95
96
1
351
23
10
27
37
1.88
7966--8109
38
3.8
38
79
4
141
23
14
31
30
1.94
7966--8109
75
1.9
75
82
2
182
23
14
31
30
1.94
9024--9139
44
2.6
44
93
2
196
32
3
12
50
1.57
9025--9160
23
6.1
23
67
19
83
32
3
12
51
1.57
9131--9236
39
2.7
39
82
7
135
32
5
13
49
1.65
9050--9236
100
1.8
102
83
10
247
31
5
13
50
1.64
12749--12799
21
2.4
21
86
0
75
66
7
7
17
1.41
14265--14303
21
1.9
20
84
5
51
53
0
0
46
1.00

Tables:   1

The End!