Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023193.1 Corchorus olitorius cultivar O-4 contig23226, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15491

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1546--1586
21
1.9
22
90
5
66
51
9
17
21
1.74
4467--4572
27
3.9
27
93
1
167
36
24
18
19
1.94
4905--5663
69
11.1
68
88
4
1009
27
16
29
26
1.97
5861--6087
91
2.5
91
94
1
393
37
13
20
29
1.90
7683--7735
27
2.0
27
85
7
72
3
15
0
81
0.83
7695--7735
18
2.2
19
86
4
57
0
14
0
85
0.60
9784--9825
21
2.0
22
90
4
68
35
11
28
23
1.91
14547--14652
27
3.9
27
91
1
158
36
23
18
20
1.95

Tables:   1

The End!