Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023198.1 Corchorus olitorius cultivar O-4 contig23231, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16303

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76--109
13
2.5
14
85
9
52
5
8
14
70
1.31
2737--2784
23
2.1
23
92
0
78
33
4
14
47
1.63
10022--10098
31
2.5
31
83
6
86
46
22
10
20
1.80
11490--11548
19
3.3
19
68
18
54
10
16
15
57
1.64
11473--11564
34
2.7
34
91
0
148
8
17
14
59
1.59
12762--12836
27
2.8
27
83
2
89
36
21
20
22
1.96
13667--14278
201
3.1
199
87
4
858
34
13
17
33
1.90
15258--15301
22
2.0
22
81
0
52
47
4
13
34
1.63
15290--15357
18
3.6
18
84
6
73
51
13
1
33
1.50
15310--15382
19
3.8
19
82
5
76
54
12
2
30
1.51
15423--15471
22
2.3
22
85
3
64
53
6
12
28
1.62

Tables:   1

The End!