Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023201.1 Corchorus olitorius cultivar O-4 contig23234, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8880

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106--158
22
2.5
21
84
6
79
30
45
7
16
1.75
1633--1672
19
2.0
20
95
4
73
0
20
27
52
1.46
2264--2300
12
3.0
12
96
4
65
89
0
10
0
0.49
2264--2300
13
2.9
13
92
4
58
89
0
10
0
0.49
5736--5783
24
2.0
25
87
4
71
14
14
0
70
1.16
6999--7053
28
2.0
28
88
0
83
20
20
16
43
1.88

Tables:   1

The End!