Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023203.1 Corchorus olitorius cultivar O-4 contig23236, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13913

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1986--2019
12
2.9
12
91
4
52
32
11
17
38
1.86
1986--2037
21
2.3
23
87
6
72
34
9
17
38
1.82
3713--3814
39
2.5
40
81
7
100
21
8
14
54
1.67
3866--3947
35
2.4
33
78
11
85
42
8
12
36
1.73
6956--7005
21
2.4
21
89
0
73
16
48
24
12
1.79
7363--7393
16
2.0
16
93
6
55
12
16
6
64
1.47
8844--8903
29
2.0
31
87
6
88
35
8
18
38
1.81
13404--13500
28
3.5
28
88
5
135
18
15
23
42
1.88

Tables:   1

The End!