Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023212.1 Corchorus olitorius cultivar O-4 contig23245, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6224

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
753--1618
40
21.7
39
84
7
989
36
9
21
31
1.86
1809--2208
137
2.9
136
91
4
619
34
17
20
27
1.95
3107--3142
10
3.5
10
85
7
54
0
13
0
86
0.58
3107--3142
16
2.2
16
90
9
56
0
13
0
86
0.58
3430--3456
7
3.9
7
100
0
54
25
14
0
59
1.36
3480--3515
17
2.2
16
90
5
54
0
11
2
86
0.68
3933--3969
8
4.8
8
84
15
51
2
18
0
78
0.87

Tables:   1

The End!