Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023214.1 Corchorus olitorius cultivar O-4 contig23247, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70981

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14427--14521
29
3.4
27
77
13
95
35
25
14
24
1.93
20150--20213
26
2.4
26
82
7
76
46
3
6
43
1.44
21264--21288
13
1.9
13
100
0
50
56
0
0
44
0.99
21851--21875
12
2.1
12
100
0
50
52
8
8
32
1.60
22214--22247
12
2.7
12
90
9
50
35
5
23
35
1.79
28011--28049
15
2.5
15
91
4
60
64
12
10
12
1.51
31404--31461
31
1.9
31
86
10
84
37
24
3
34
1.72
34778--34810
13
2.6
13
90
4
50
27
24
9
39
1.85
42956--43034
41
1.9
41
97
0
149
39
15
18
26
1.91
53304--53337
6
5.7
6
100
0
68
35
0
64
0
0.94
69594--69641
16
3.0
16
82
11
62
0
10
10
79
0.95
70951--70979
2
14.5
2
100
0
58
48
0
0
51
1.00

Tables:   1

The End!