Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023215.1 Corchorus olitorius cultivar O-4 contig23248, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27836

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1549--1766
109
2.0
109
95
0
391
44
14
9
31
1.78
7490--7641
76
2.0
78
85
3
209
27
13
16
42
1.85
7857--7892
16
2.2
17
95
5
65
22
19
5
52
1.66
9339--9414
38
2.0
38
100
0
152
23
31
26
18
1.97
9784--9829
23
2.0
24
95
4
85
28
21
26
23
1.99
9786--9838
23
2.3
23
86
3
70
26
22
30
20
1.98
14676--14706
2
15.5
2
100
0
62
51
0
0
48
1.00
16317--16425
31
3.5
31
97
2
211
30
10
12
46
1.75
16939--17046
51
2.1
51
96
0
198
42
7
12
37
1.72
22065--22233
28
6.0
28
97
0
320
22
36
16
24
1.94
22277--22310
10
3.5
10
84
8
52
0
11
0
88
0.52
23443--23472
15
2.0
15
93
0
51
23
40
6
30
1.80
26023--26130
57
1.9
56
86
3
153
32
14
17
35
1.91

Tables:   1

The End!