Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023216.1 Corchorus olitorius cultivar O-4 contig23249, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12188

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22--62
20
2.0
20
100
0
82
19
4
4
70
1.24
561--961
201
2.0
201
93
3
684
44
8
11
35
1.71
1079--1160
40
2.0
40
88
4
121
37
3
6
52
1.44
5147--5311
31
5.5
31
64
11
108
33
16
20
30
1.94
5139--5308
60
2.8
60
91
0
277
33
14
20
31
1.93
5353--5485
31
4.4
31
75
12
114
24
18
17
39
1.92
7949--8042
45
2.2
43
90
7
147
38
23
5
32
1.77
9529--9560
16
2.0
16
93
0
55
21
18
15
43
1.87

Tables:   1

The End!