Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023218.1 Corchorus olitorius cultivar O-4 contig23251, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4865

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
304--392
45
2.0
43
87
6
126
38
19
5
37
1.75
2168--2208
3
13.3
3
94
5
73
65
0
0
34
0.93
2298--2323
11
2.4
11
100
0
52
84
0
0
15
0.62
3788--3820
2
16.5
2
100
0
66
48
0
0
51
1.00
4684--4739
2
29.5
2
82
10
73
53
0
0
46
1.00
4684--4730
17
2.8
17
81
15
62
55
0
0
44
0.99
4685--4739
21
2.6
21
91
2
83
54
0
0
45
0.99

Tables:   1

The End!