Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023219.1 Corchorus olitorius cultivar O-4 contig23252, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73618

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--44
2
21.5
2
95
4
77
47
0
0
52
1.00
13304--13378
37
2.0
37
94
0
132
21
26
14
37
1.92
21417--21451
11
3.2
11
91
0
61
0
2
17
80
0.84
27825--28002
35
5.1
35
78
8
159
43
11
14
30
1.80
27818--28002
69
2.7
69
85
3
237
44
11
14
30
1.80
27831--28033
69
2.9
70
83
2
205
41
9
15
33
1.80
28005--28166
51
3.1
50
82
10
173
43
3
19
32
1.69
28186--28274
43
2.0
44
82
6
110
49
2
21
26
1.61
28259--28399
47
2.8
52
83
9
154
48
7
17
27
1.73
31525--31567
18
2.4
18
96
3
79
27
4
18
48
1.68
33675--33700
11
2.4
11
100
0
52
7
15
7
69
1.35
38989--39160
45
3.8
45
96
2
310
32
6
22
38
1.80
51657--51695
17
2.3
17
86
0
51
38
0
2
58
1.12
51664--51696
17
1.9
17
93
0
57
39
0
0
60
0.97
58347--58392
22
2.1
22
100
0
92
23
23
26
26
2.00
64138--64227
29
3.1
29
82
7
76
21
24
16
37
1.93
64157--64227
29
2.4
29
86
4
90
18
23
18
39
1.92
64820--64887
2
34.5
2
73
14
52
47
7
0
45
1.31
66873--66914
22
1.9
22
85
9
59
40
28
19
11
1.87
68114--68367
133
1.9
132
90
2
402
49
1
10
38
1.46

Tables:   1

The End!