Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023227.1 Corchorus olitorius cultivar O-4 contig23260, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57369

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
976--1025
21
2.4
21
93
0
82
18
48
24
10
1.78
4285--4326
15
2.7
15
96
3
75
11
7
14
66
1.43
17683--17749
30
2.2
30
91
2
107
26
8
29
34
1.87
21573--21621
23
2.1
23
88
7
73
36
32
2
28
1.69
30475--30699
75
3.0
75
86
0
324
23
25
15
36
1.93
33929--34005
40
1.9
40
89
0
118
33
12
15
37
1.86
41958--42027
37
1.9
37
83
11
92
12
41
32
12
1.82
46613--46681
9
7.7
9
75
18
72
75
11
0
13
1.05
46614--46654
17
2.4
17
95
4
73
78
9
0
12
0.98
46613--46681
26
2.6
25
82
15
77
75
11
0
13
1.05
47268--47413
50
2.9
50
84
4
186
32
19
15
33
1.92
47868--48020
79
1.9
79
94
0
270
30
19
13
37
1.90
48107--48242
50
2.7
50
95
0
236
29
27
13
29
1.94
48203--48540
69
4.9
69
94
0
577
27
28
15
29
1.96

Tables:   1

The End!