Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023228.1 Corchorus olitorius cultivar O-4 contig23261, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7894

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
412--881
30
15.6
30
80
6
405
45
17
14
21
1.84
394--881
60
8.1
60
81
3
505
46
17
14
21
1.84
394--878
90
5.4
90
83
5
505
46
17
14
22
1.83
1143--1553
71
5.8
71
81
4
434
43
17
19
19
1.88
1143--1580
36
12.3
36
81
4
424
42
17
19
19
1.89
1143--1553
142
2.9
141
83
4
486
43
17
19
19
1.88
1142--1580
107
4.1
108
85
3
516
42
17
19
19
1.89

Tables:   1

The End!