Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023231.1 Corchorus olitorius cultivar O-4 contig23264, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12437

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3696--3756
6
10.2
6
84
7
79
18
65
1
14
1.35
4179--4376
42
4.7
42
79
5
209
17
49
13
19
1.79
4160--4376
87
2.5
86
88
2
305
17
48
14
19
1.80
4418--4498
27
2.9
27
75
12
83
18
51
12
17
1.75
4527--4885
63
5.7
63
95
0
628
16
51
19
11
1.75
6201--6250
2
25.0
2
100
0
100
50
0
0
50
1.00
7926--7963
20
1.9
20
88
0
58
68
2
28
0
1.03

Tables:   1

The End!