Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023233.1 Corchorus olitorius cultivar O-4 contig23266, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29346

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2392--2432
21
1.9
22
90
5
66
19
24
12
43
1.85
3518--3547
14
2.1
15
93
6
53
43
6
16
33
1.74
5016--5053
15
2.6
14
91
4
58
68
23
7
0
1.16
9559--9631
27
2.7
27
82
4
94
45
21
13
19
1.85
10285--10614
84
3.9
84
87
4
434
23
9
26
40
1.84
10279--10617
43
8.0
42
77
13
297
24
8
27
39
1.84
10285--10614
168
2.0
168
90
5
524
23
9
26
40
1.84
22285--22321
18
2.1
18
100
0
74
40
16
21
21
1.91
24235--24472
118
2.0
118
97
0
449
36
19
15
27
1.92

Tables:   1

The End!