Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023234.1 Corchorus olitorius cultivar O-4 contig23267, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37741

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7183--7288
50
2.1
50
91
0
167
26
23
11
38
1.88
8784--8837
19
2.6
21
77
19
60
38
18
3
38
1.69
9063--9181
50
2.4
50
92
0
193
23
25
11
39
1.88
9398--9820
64
6.6
64
89
0
612
27
22
15
34
1.94
9791--9987
68
2.9
68
90
2
299
26
22
12
38
1.90
11798--11834
12
3.1
12
92
0
65
24
8
16
51
1.71
22152--22188
15
2.5
15
90
0
56
18
8
45
27
1.77
35241--35280
17
2.4
17
95
0
71
47
22
20
10
1.79
35558--35640
43
1.9
43
85
4
114
36
13
25
25
1.92

Tables:   1

The End!