Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023241.1 Corchorus olitorius cultivar O-4 contig23274, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15747

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
166--227
28
2.2
28
79
0
70
50
9
6
33
1.61
2053--2103
20
2.4
20
83
9
57
37
17
7
37
1.79
2064--2103
20
1.9
21
90
10
64
35
20
7
37
1.81
3095--3238
76
1.9
73
83
6
182
38
9
19
32
1.84
8057--8116
30
2.0
30
90
0
93
50
13
11
25
1.75
8150--8245
29
3.3
29
92
2
149
35
23
13
27
1.93
8446--8491
8
5.5
8
82
10
56
73
2
13
10
1.17
9537--9639
50
2.1
50
90
0
161
27
16
15
40
1.88

Tables:   1

The End!