Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023244.1 Corchorus olitorius cultivar O-4 contig23277, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47623

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6560--6591
14
2.4
13
94
5
55
21
28
6
43
1.77
7928--8001
35
2.1
35
97
0
139
18
18
13
48
1.80
11729--11809
42
1.9
42
89
0
126
29
8
12
49
1.70
15810--15996
84
2.1
89
82
10
224
41
17
24
16
1.89
16495--16535
17
2.4
17
91
0
64
7
24
4
63
1.40
35786--35840
28
2.0
28
89
7
85
32
21
9
36
1.85
45642--46015
178
2.1
177
83
5
461
33
13
15
37
1.87
47270--47585
128
2.6
119
81
9
361
37
19
18
23
1.94

Tables:   1

The End!