Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023247.1 Corchorus olitorius cultivar O-4 contig23280, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10162

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71--122
25
2.1
24
89
3
77
59
3
5
30
1.39
71--131
25
2.6
25
84
7
74
59
4
6
29
1.44
943--995
26
2.0
27
88
3
81
56
0
5
37
1.23
1168--1198
15
2.1
15
100
0
62
45
0
12
41
1.42
2116--2212
48
2.0
48
93
0
167
37
14
12
36
1.84
4099--4149
19
2.7
19
93
0
84
39
17
19
23
1.92
8836--8899
21
3.2
20
82
8
76
35
12
23
28
1.91
8842--8899
19
2.9
19
84
5
71
36
12
24
27
1.91

Tables:   1

The End!