Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023250.1 Corchorus olitorius cultivar O-4 contig23283, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35621

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2598--2625
11
2.5
11
100
0
56
35
0
17
46
1.49
5353--5391
21
1.9
20
84
5
51
69
10
5
15
1.34
5605--5644
3
13.0
3
89
5
62
2
35
0
62
1.09
11241--11285
21
2.1
21
100
0
90
46
17
15
20
1.84
13631--13735
31
3.5
31
74
7
99
27
24
12
35
1.91
15486--15527
18
2.3
18
91
0
66
45
9
4
40
1.58
20354--20409
26
2.2
26
90
0
85
39
32
8
19
1.83
20856--20932
32
2.4
32
74
6
77
9
10
28
51
1.66
21016--21076
16
3.8
16
74
8
61
18
6
34
40
1.76
21221--21259
20
2.0
20
84
0
51
33
7
7
51
1.59
21263--21305
22
2.0
22
100
0
86
4
13
34
46
1.65
21279--21373
16
6.1
15
72
10
66
8
12
28
50
1.69
21800--21831
11
2.8
12
86
13
50
43
0
21
34
1.53
21909--21944
19
1.9
20
88
11
58
36
0
0
63
0.94

Tables:   1

The End!