Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023255.1 Corchorus olitorius cultivar O-4 contig23288, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14136

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3941--4066
62
2.0
62
84
4
164
47
15
15
20
1.82
9966--10204
121
2.0
121
93
0
406
39
20
12
28
1.88
10412--10440
11
2.7
11
94
5
51
0
27
62
10
1.28
10578--10628
22
2.2
24
83
16
72
41
0
0
58
0.98
10578--10626
25
2.0
25
84
8
64
40
0
0
59
0.98
12400--12432
2
16.5
2
100
0
66
48
0
0
51
1.00

Tables:   1

The End!