Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023259.1 Corchorus olitorius cultivar O-4 contig23292, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27714

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4105--4228
66
1.9
66
81
0
95
29
16
18
36
1.92
4251--4633
66
5.8
66
84
1
457
26
14
19
39
1.90
4104--4633
198
2.6
202
78
6
543
26
14
18
39
1.90
7652--7712
30
2.0
30
93
6
106
47
3
22
26
1.67
12035--12090
29
1.9
29
92
0
94
32
26
8
32
1.87
13298--13370
29
2.4
30
72
4
76
32
10
23
32
1.89
14215--14245
5
6.2
5
92
0
53
58
0
41
0
0.98
15451--15503
25
2.2
24
89
3
79
26
18
13
41
1.87
17853--17895
20
2.2
20
86
0
59
2
13
16
67
1.33
18008--18087
39
2.0
41
92
4
137
53
3
20
22
1.61
26886--26910
8
3.1
8
100
0
50
28
24
0
48
1.52
27556--27586
1
31.0
1
93
0
53
0
3
0
96
0.21
27557--27593
17
2.2
17
90
0
56
2
8
0
89
0.58

Tables:   1

The End!