Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023260.1 Corchorus olitorius cultivar O-4 contig23293, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35062

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2332--2455
22
5.6
22
80
3
124
33
12
16
37
1.87
2336--2455
44
2.7
44
84
0
141
34
13
16
35
1.88
2332--2455
66
1.9
66
82
0
158
33
12
16
37
1.87
4791--4818
2
14.0
2
100
0
56
50
0
0
50
1.00
5800--6373
99
5.8
98
80
10
648
29
19
12
38
1.89
5911--6369
198
2.3
198
92
1
751
29
20
12
37
1.90
8791--8864
13
5.8
13
80
10
82
36
13
16
33
1.88
8791--8867
24
3.0
25
77
7
84
36
14
15
33
1.88
22447--22497
24
2.1
24
82
7
59
72
19
1
5
1.15
22815--22839
12
2.1
12
100
0
50
40
32
0
28
1.57
26723--26803
7
11.6
7
77
9
51
4
13
4
76
1.11
26723--26757
6
5.7
6
89
3
52
0
14
2
82
0.77
27998--28039
19
2.3
19
80
8
52
64
0
11
23
1.27
30381--30423
22
2.0
22
85
0
59
39
2
9
48
1.48

Tables:   1

The End!