Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023262.1 Corchorus olitorius cultivar O-4 contig23295, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14446

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2852--2891
21
1.9
21
94
0
71
25
37
22
15
1.93
2928--2967
21
1.9
21
94
0
71
22
32
22
22
1.98
2844--3039
73
2.7
71
88
3
286
32
26
22
18
1.97
2997--3039
22
2.0
22
90
0
68
23
32
23
20
1.98
8722--8768
26
1.9
23
87
12
67
40
4
27
27
1.75
11641--12549
154
5.9
154
94
0
1557
21
18
18
41
1.91
11641--12549
463
2.0
462
93
0
1577
21
18
18
41
1.91
12422--12673
125
2.0
125
92
0
423
22
16
19
41
1.90
12267--12826
279
2.0
280
91
0
906
22
18
19
39
1.92
12547--14435
154
12.3
154
89
1
2731
22
18
19
40
1.92
12547--14435
307
6.2
306
89
2
2668
22
18
19
40
1.92

Tables:   1

The End!