Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023263.1 Corchorus olitorius cultivar O-4 contig23296, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4344

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
432--478
22
2.1
22
84
7
60
61
2
12
23
1.42
357--539
91
2.0
93
90
4
291
52
2
12
33
1.50
575--636
31
2.0
31
87
0
88
40
8
22
29
1.82
3090--3561
198
2.4
198
92
0
782
29
20
13
36
1.91
3090--3561
99
4.8
99
77
11
507
29
20
13
36
1.91
3853--4106
132
2.0
123
87
6
364
37
11
1
50
1.49
4093--4131
14
2.9
13
80
3
51
41
2
2
53
1.28
4148--4318
85
2.0
86
95
1
308
40
9
1
47
1.44

Tables:   1

The End!