Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023279.1 Corchorus olitorius cultivar O-4 contig23312, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43301

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1322--1389
29
2.3
29
78
14
77
19
23
16
41
1.90
7648--7691
16
2.6
17
82
7
54
54
2
43
0
1.12
19084--19162
33
2.4
33
84
0
95
25
6
22
45
1.76
19109--19210
33
3.1
33
84
8
111
26
6
21
45
1.77
29919--29981
29
2.1
31
91
5
103
19
28
15
36
1.92
31619--31665
21
2.2
22
88
3
69
57
0
10
31
1.33
32262--32496
117
2.0
116
86
6
332
36
14
2
46
1.60

Tables:   1

The End!