Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023288.1 Corchorus olitorius cultivar O-4 contig23321, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14057

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
161--191
2
16.0
2
93
6
55
48
0
0
51
1.00
1548--1665
22
5.4
22
79
8
109
38
9
15
36
1.79
4725--4795
21
3.2
21
67
21
63
30
23
12
32
1.92
4754--4819
32
2.1
30
88
5
96
36
25
6
31
1.81
4730--4799
16
4.5
16
70
20
67
31
24
11
32
1.91
10572--10627
23
2.5
22
75
11
60
17
10
12
58
1.61

Tables:   1

The End!