Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023289.1 Corchorus olitorius cultivar O-4 contig23322, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23111

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--39
15
2.3
15
89
0
50
26
47
8
17
1.77
1274--1313
21
1.9
21
89
0
62
15
37
20
27
1.92
5237--5339
51
2.0
50
81
5
118
20
21
13
44
1.85
17314--17349
19
2.0
18
89
10
56
69
0
2
27
1.02
17599--17720
64
1.9
64
89
0
190
36
14
17
31
1.90
21505--21558
23
2.5
24
80
17
64
55
3
1
38
1.28

Tables:   1

The End!