Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023302.1 Corchorus olitorius cultivar O-4 contig23335, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23682

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2144--2229
44
1.9
46
90
4
140
47
10
10
31
1.72
2203--2248
24
1.9
24
86
0
65
50
8
8
32
1.64
2512--2556
18
2.5
18
81
0
63
44
0
4
51
1.21
3901--4002
51
2.0
50
80
12
111
22
22
12
42
1.87
4987--5044
30
2.0
29
89
3
89
29
13
10
46
1.77
10809--10864
27
2.1
27
100
0
112
28
10
25
35
1.89
11291--11400
47
2.3
48
85
3
150
12
10
24
51
1.72
16771--16799
2
14.5
2
100
0
58
48
0
0
51
1.00

Tables:   1

The End!