Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023307.1 Corchorus olitorius cultivar O-4 contig23340, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36676

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2159--2237
40
2.0
39
85
2
104
41
7
18
31
1.79
2433--2462
2
15.0
2
100
0
60
50
0
0
50
1.00
23597--23637
20
2.1
19
86
4
55
65
7
21
4
1.37
25629--25664
17
2.1
17
89
0
54
0
33
0
66
0.92
31903--31927
11
2.3
11
100
0
50
60
8
0
32
1.26
32874--32908
6
6.0
6
93
6
63
82
0
0
17
0.66
32874--32908
11
3.0
12
91
8
63
82
0
0
17
0.66
33695--33736
3
14.0
3
89
0
66
30
0
2
66
1.04
34076--34102
2
13.5
2
100
0
54
51
0
0
48
1.00
36276--36310
16
2.2
16
100
0
70
45
17
25
11
1.81
36406--36629
41
5.4
41
88
3
304
37
19
14
29
1.91
36406--36646
126
2.0
122
83
5
297
36
19
14
29
1.91

Tables:   1

The End!