Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023309.1 Corchorus olitorius cultivar O-4 contig23342, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37958

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12939--13019
39
2.1
39
85
0
108
38
9
16
35
1.81
20095--20340
84
2.9
84
85
4
311
38
24
11
25
1.89
20142--20340
41
4.8
41
76
4
159
38
24
12
25
1.90
25367--25415
2
24.5
2
91
0
80
53
2
44
0
1.12
26747--26779
17
1.9
17
88
11
50
39
0
0
60
0.97
27740--27931
93
2.0
97
89
4
302
51
2
12
33
1.51
28799--28856
10
6.1
10
78
11
59
68
1
1
27
1.08

Tables:   1

The End!