Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023326.1 Corchorus olitorius cultivar O-4 contig23359, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6996

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
891--1895
40
25.0
39
80
9
236
37
11
20
30
1.88
983--1060
27
2.9
26
86
5
111
44
14
16
24
1.84
1116--1932
40
20.6
40
87
3
1046
35
10
22
31
1.87
1870--1971
39
2.7
37
78
3
114
37
12
23
26
1.91
2036--2544
148
3.5
147
91
3
791
34
17
20
27
1.95
3822--3863
19
2.2
20
91
4
68
21
21
0
57
1.41

Tables:   1

The End!