Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023333.1 Corchorus olitorius cultivar O-4 contig23366, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12925

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4516--4593
28
2.8
28
94
0
129
44
24
14
16
1.84
6160--6252
42
2.2
43
88
5
145
26
25
7
39
1.82
6160--6292
42
3.1
42
83
5
144
24
24
10
40
1.86
7455--7505
15
3.5
15
86
2
59
43
7
11
37
1.71
8345--8415
21
3.4
21
92
3
108
26
26
16
29
1.97
10628--11104
67
7.1
66
85
5
586
40
12
22
24
1.89
10649--11105
200
2.3
201
85
6
602
40
12
22
25
1.89
11124--11458
64
5.2
64
78
6
372
35
14
22
27
1.93
11131--11458
129
2.5
129
85
1
453
35
14
22
27
1.93
11589--11637
26
1.9
26
83
4
64
34
16
18
30
1.93
11687--11964
51
5.5
51
88
5
381
38
10
25
25
1.88
11687--11964
151
1.8
149
87
7
409
38
10
25
25
1.88
11687--12011
102
3.2
101
84
7
326
38
11
25
24
1.89

Tables:   1

The End!