Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023351.1 Corchorus olitorius cultivar O-4 contig23384, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4961

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28--67
1
40.0
1
94
0
71
97
0
0
0
0.04
57--163
36
3.0
36
85
0
133
54
12
23
10
1.68
948--1418
58
8.1
58
90
4
682
27
14
15
42
1.86
1682--1855
29
6.0
28
75
10
152
21
23
18
36
1.95
1691--1854
88
1.9
88
97
0
310
20
23
18
37
1.94
2822--2854
17
1.9
17
100
0
66
36
15
24
24
1.93

Tables:   1

The End!