Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023356.1 Corchorus olitorius cultivar O-4 contig23389, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12194

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2744--2798
24
2.3
24
87
0
74
45
14
20
20
1.85
3043--3118
28
2.7
28
89
2
107
36
27
18
17
1.93
3748--3784
16
2.3
15
86
13
56
0
5
32
62
1.18
6677--6771
41
2.3
41
81
0
118
44
13
16
25
1.85
10391--10433
21
2.1
21
82
4
52
30
20
16
32
1.95
10983--11029
26
1.9
23
83
12
58
29
27
4
38
1.76

Tables:   1

The End!