Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023365.1 Corchorus olitorius cultivar O-4 contig23398, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9525

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--172
33
5.1
32
78
7
169
26
9
23
40
1.85
4--172
66
2.6
65
90
3
257
26
9
23
40
1.85
12--215
33
6.2
32
77
6
160
28
9
21
40
1.84
4--205
66
3.1
66
85
4
194
27
9
22
40
1.85
20--205
99
1.9
99
81
6
225
26
8
23
41
1.83
2156--2197
21
2.0
20
86
4
57
30
19
21
28
1.97
5524--5611
36
2.4
36
96
0
158
35
13
13
37
1.84
7630--7809
41
4.4
40
87
3
189
23
13
15
46
1.82
7632--7809
82
2.2
82
83
2
214
24
14
15
46
1.83
9291--9330
21
1.9
21
89
0
62
27
37
20
15
1.92

Tables:   1

The End!