Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023375.1 Corchorus olitorius cultivar O-4 contig23408, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15653

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5553--5748
33
5.9
33
78
6
184
43
21
9
25
1.82
5548--5728
99
1.8
99
82
4
231
43
22
8
26
1.81
5568--5760
66
2.9
66
92
1
307
42
22
9
25
1.83
7300--7346
26
1.9
24
87
12
69
40
4
27
27
1.75
10734--10810
37
2.1
37
95
0
136
38
14
23
23
1.91
10976--11109
21
6.4
21
92
1
191
26
27
17
28
1.97
12931--13042
33
3.4
33
80
7
120
44
19
9
25
1.81
15507--15640
21
6.4
21
92
1
191
26
26
17
29
1.97

Tables:   1

The End!