Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023383.1 Corchorus olitorius cultivar O-4 contig23416, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20661

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
518--622
52
2.0
52
98
0
201
24
23
27
23
2.00
576--619
22
2.0
22
86
0
61
25
25
22
27
2.00
2654--2700
26
1.9
26
87
12
73
40
4
27
27
1.75
4904--4948
20
2.2
21
88
4
65
51
6
13
28
1.66
8008--8051
21
2.1
21
91
0
70
15
47
22
13
1.81
12587--12615
15
1.9
15
100
0
58
51
27
6
13
1.66
13202--13282
33
2.5
33
83
4
92
22
8
23
45
1.79
13229--13333
33
3.2
31
84
11
129
24
6
23
44
1.77
18113--18183
21
3.4
21
94
3
117
25
26
19
28
1.99
18952--19016
34
1.9
33
90
3
103
46
23
7
23
1.78
18952--19070
34
3.6
32
75
12
98
44
18
9
27
1.80

Tables:   1

The End!