Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023388.1 Corchorus olitorius cultivar O-4 contig23421, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13369

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2441--2481
21
2.0
21
90
0
64
26
21
29
21
1.99
3659--3745
29
3.0
29
75
9
81
44
35
9
10
1.70
7851--7890
19
2.1
19
86
9
55
2
0
62
35
1.09
8582--8775
75
2.5
78
94
3
340
17
39
3
40
1.65
9147--9206
18
3.3
18
70
9
50
3
48
3
45
1.35
10245--10282
7
5.6
7
87
6
60
0
42
0
57
0.98
10243--10278
9
3.8
9
86
13
54
0
41
0
58
0.98
10243--10281
20
2.0
20
100
0
78
0
41
0
58
0.98

Tables:   1

The End!