Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023392.1 Corchorus olitorius cultivar O-4 contig23425, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4219

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
145--187
21
2.1
21
86
4
61
27
20
18
32
1.96
428--1090
154
4.3
154
93
1
1118
22
18
17
42
1.90
428--1090
309
2.2
305
93
1
1121
22
18
17
42
1.90
1200--1241
21
2.0
21
95
0
75
21
19
26
33
1.97
2037--2723
154
4.5
154
94
0
1180
21
17
18
41
1.90

Tables:   1

The End!