Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023402.1 Corchorus olitorius cultivar O-4 contig23435, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7361

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
937--965
10
3.0
10
95
5
51
72
0
0
27
0.85
2975--3039
14
4.8
13
87
12
87
43
9
10
36
1.72
3659--3714
17
3.6
15
83
11
69
80
3
14
1
0.93
3659--3721
16
4.0
16
86
10
76
77
4
14
3
1.05
3674--3725
17
3.1
17
86
5
70
75
5
15
3
1.14
3847--4102
87
2.9
87
92
1
415
37
10
23
28
1.88
4873--5151
37
7.5
37
80
3
285
23
20
15
41
1.89
4845--5152
74
4.2
73
81
3
375
24
20
14
41
1.89
5251--5671
215
1.9
217
87
4
620
26
13
21
37
1.91
5251--5671
54
7.8
54
89
2
580
26
13
21
37
1.91
5645--5764
55
2.2
55
78
11
131
29
20
21
29
1.98
5779--5852
33
2.2
33
87
0
103
44
18
4
32
1.69
5988--6139
7
21.4
7
90
2
178
59
18
0
21
1.41

Tables:   1

The End!