Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023405.1 Corchorus olitorius cultivar O-4 contig23438, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33958

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2072--2103
15
2.1
16
94
5
57
3
90
0
6
0.53
12939--12973
11
3.2
11
87
0
52
77
0
14
8
0.99
15732--15760
13
2.2
13
100
0
58
27
13
31
27
1.94
20193--20267
24
3.2
24
70
11
84
32
6
13
48
1.68
20178--20267
45
2.0
45
100
0
180
31
6
13
48
1.68
20178--20244
21
3.0
21
67
12
62
28
7
13
50
1.68
20187--20256
21
3.2
21
69
11
68
34
5
15
44
1.71
26388--26423
19
1.9
18
88
5
54
41
8
22
27
1.82
27028--27063
18
1.9
19
94
5
65
11
13
8
66
1.44
30706--30765
29
2.0
30
87
6
86
35
18
8
38
1.81
32635--32694
21
2.8
21
76
2
66
15
23
45
16
1.85
32897--32937
21
2.0
21
85
0
55
26
19
48
4
1.69

Tables:   1

The End!