Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: AWUE01023416.1 Corchorus olitorius cultivar O-4 contig23449, whole genome shotgun sequence Parameters: 2 7 7 80 10 50 1000 Length: 8912

Tables:   1   

This is table  1  of  1  ( 4 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
464--508
14
3.5
12
84
9
54
31
0
11
57
1.33
3243--3314
26
2.7
27
82
4
92
20
16
25
37
1.93
3800--3840
20
2.0
20
95
0
73
26
9
24
39
1.86
5957--6048
21
4.4
21
95
2
150
27
27
17
28
1.98

Tables:   1   

The End!