Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023418.1 Corchorus olitorius cultivar O-4 contig23451, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10837

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
413--483
21
3.4
21
94
3
117
26
26
18
28
1.98
5698--5733
19
1.9
19
88
5
56
27
0
2
69
1.02
5848--5894
26
1.9
24
87
12
69
40
4
27
27
1.75
6769--6827
21
2.8
21
94
5
102
25
27
18
28
1.98
7539--8304
60
12.9
58
88
2
910
26
15
18
39
1.90
7539--8306
59
12.9
60
87
4
963
26
15
17
39
1.90
8343--8661
59
5.3
58
83
7
390
26
13
16
43
1.85
8343--8661
120
2.7
115
87
7
433
26
13
16
43
1.85
8645--8680
19
1.9
19
94
5
65
19
13
11
55
1.68
8514--8798
138
2.1
138
89
2
439
27
14
15
42
1.86
8653--8809
59
2.6
59
85
6
210
26
14
17
41
1.88
9049--9116
29
2.4
29
85
4
95
16
16
26
41
1.88

Tables:   1

The End!