Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023420.1 Corchorus olitorius cultivar O-4 contig23453, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16688

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3178--3248
21
3.4
21
90
3
108
26
26
16
29
1.97
3884--3933
13
3.8
13
81
2
55
0
22
2
76
0.89
3885--3935
27
1.9
26
88
4
75
0
21
1
76
0.88
14023--14326
30
10.1
30
86
4
425
46
20
14
18
1.84
14017--14326
120
2.6
120
90
2
514
46
19
14
18
1.84
14286--14359
38
1.9
38
86
0
103
51
17
14
16
1.77
14467--14752
139
2.1
139
94
1
502
34
18
17
29
1.94
14753--15270
170
3.1
169
92
1
869
33
17
20
28
1.95
15134--15372
122
2.0
122
86
3
338
37
17
19
25
1.93

Tables:   1

The End!