Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023426.1 Corchorus olitorius cultivar O-4 contig23459, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19075

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1387--1433
23
2.0
23
87
0
67
12
14
6
65
1.44
1333--1482
78
1.9
79
87
4
223
24
15
6
54
1.63
1412--1779
57
6.5
57
77
15
336
23
19
3
53
1.61
1489--1580
46
2.0
46
95
0
166
29
16
4
50
1.64
1526--1790
58
4.5
58
82
8
318
22
19
3
54
1.59
1565--1807
123
2.0
122
90
0
378
20
20
3
55
1.57
4025--4059
2
17.5
2
93
0
61
48
48
0
2
1.16
8055--8091
14
2.6
15
83
8
51
13
24
0
62
1.31
9158--9182
6
4.2
6
100
0
50
16
0
0
84
0.63

Tables:   1

The End!